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Cell biology · The cell and its organisation

Cell organelles

Inside a eukaryotic cell, each vital function has its own compartment. Knowing which organelle does what, and how they are related to one another, makes it possible to explain processes as different as respiring, photosynthesizing or making a hormone such as insulin. Picture a soccer player sprinting in the last minutes of a match: her muscle cells are burning through ATP. Where does that ATP come from? By the end of this page you will know.

Organelles and their function

Under the transmission electron microscope, the cytoplasm of a cell is not a homogeneous solution but a maze of isolated compartments where thousands of chemically incompatible reactions take place at the same time. How does the cell manage to organize and physically separate all these vital functions?

Classification of organelles: with a membrane, the nucleus and the mitochondrion (double membrane) and the Golgi apparatus (single membrane); without a membrane, ribosomes, made of RNA and protein and attached to a messenger RNA. With a membrane Without a membrane large subunit small subunit mRNA nucleus mitochondrion Golgi apparatus ribosomes double membrane double membrane single membrane RNA + proteins
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Match each organelle with its basic function: mitochondrion, chloroplast, ribosome, Golgi apparatus, lysosome, endoplasmic reticulum, vacuole, and nucleus.

Match each organelle with its basic function: mitochondrion, chloroplast, ribosome, Golgi apparatus, lysosome, endoplasmic reticulum, vacuole, and nucleus.

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Classify the organelles and structures of the eukaryotic cell into two groups: membrane-bound and non-membrane-bound. Give at least two examples of each group.

Classify the organelles and structures of the eukaryotic cell into two groups: membrane-bound and non-membrane-bound. Give at least two examples of each group.

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Animal cells and plant cells

If you place human cheek epithelial cells and elodea leaf cells under the microscope, you will see that the former are rounded and deformable, whereas the plant cells are rigid and polygonal and full of green granules. Which exclusive structures distinguish the architecture of a plant cell from that of an animal cell?

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Indicate which organelles and structures are characteristic of the plant cell and absent in the animal cell, and which are shared by both cell types.

Indicate which organelles and structures are characteristic of the plant cell and absent in the animal cell, and which are shared by both cell types.

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In a cross-section of an animal eukaryotic cell, six characteristic organelles or structures can be distinguished: 1) mitochondrion, 2) rough endoplasmic reticulum, 3)…

In a cross-section of an animal eukaryotic cell, six characteristic organelles or structures can be distinguished: 1) mitochondrion, 2) rough endoplasmic reticulum, 3) Golgi apparatus, 4) lysosome, 5) nucleus, and 6) centrosome. Describe the basic function of each of them in one sentence.

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Observe the image of a sectioned eukaryotic plant cell. Identify the structures marked with numbers 1 to 6 and explain, comparing it with the animal cell, what role the…

Observe the image of a sectioned eukaryotic plant cell. Identify the structures marked with numbers 1 to 6 and explain, comparing it with the animal cell, what role the cell wall and the large vacuole play in the shape and rigidity of plant cells.

Sectioned eukaryotic plant cell

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Where each process takes place

Eukaryotic cell with four organelles labeled: the mitochondrion (aerobic respiration), the chloroplast (photosynthesis), the rough endoplasmic reticulum with ribosomes, attached to the nucleus (protein synthesis) and the lysosome (intracellular digestion). cytosol rough ER protein synthesis mitochondrion aerobic respiration chloroplast photosynthesis lysosome intracellular digestion
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Locate in which organelle or cellular structure each of these processes occurs and briefly justify your answer: aerobic respiration, photosynthesis, synthesis of…

Locate in which organelle or cellular structure each of these processes occurs and briefly justify your answer: aerobic respiration, photosynthesis, synthesis of proteins destined for secretion and intracellular digestion of aged materials.

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Morphometric electron microscopy analysis of three unknown human cell lines (A, B, and C) provides the following data regarding the percentage of cell volume occupied by…

Morphometric electron microscopy analysis of three unknown human cell lines (A, B, and C) provides the following data regarding the percentage of cell volume occupied by each organelle:

  • Type A: Mitochondria: 38 %; Smooth endoplasmic reticulum: 17 %; RER: 5 %; Golgi apparatus: 2 %; Secretory granules: < 1 %.

  • Type B: Mitochondria: 6 %; Smooth endoplasmic reticulum: 2 %; RER: 34 %; Golgi apparatus: 20 %; Secretory granules: 15 %.

  • Type C: Mitochondria: 5 %; Smooth endoplasmic reticulum: 2 %; RER: 4 %; Golgi apparatus: 3 %; Lysosomes and phagosomes: 26 %.

Reasonably assign to each cell type one of the following physiological functions: mechanical contraction and calcium homeostasis (skeletal muscle fiber), massive protein secretion (pancreatic acinar cell), or destruction of phagocytosed pathogens (macrophage). Justify each assignment by relating the assigned function to the abundance of the corresponding organelles.

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The secretion pathway and form serving function

When radioactive amino acids are supplied to pancreatic cells that make digestive enzymes, the radioactive signal appears after 3 minutes in sacs with ribosomes, after 20 minutes in the stacked cisternae of the Golgi apparatus, and after 90 minutes being expelled from the cell. What ordered route do the newly synthesized molecules follow until they leave the cell?

Animation of the secretion pathway: a small vesicle leaves the rough endoplasmic reticulum and travels to the Golgi apparatus, which lights up; from it another leaves towards the secretory vesicle, which also lights up, and from there a last one reaches the plasma membrane, where it fuses and disappears before the cycle repeats. rough ER Golgi vesicle plasmamembrane
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Consider two artificially induced cellular alterations: 1. A mutation in the MICOS proteins that maintain the curvature of the inner mitochondrial membrane leads to the…

Consider two artificially induced cellular alterations:

  1. A mutation in the MICOS proteins that maintain the curvature of the inner mitochondrial membrane leads to the complete disappearance of the cristae; the inner membrane turns into a smooth vesicle concentric to the outer membrane.

  2. A toxin selectively disrupts the continuity of the chloroplast thylakoid membranes, such that their lipid and protein components disperse into open sheets that directly connect the thylakoid lumen with the stroma.

Predict and justify the impact of each alteration on the net synthesis of ATP associated with mitochondrial respiration and the light-dependent reactions of photosynthesis, respectively. Base your arguments on Mitchell's chemiosmotic hypothesis, proton compartmentalization, and the surface-area-to-volume ratio of energy-transducing membranes.

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Cytoskeleton, cell wall and communication between cells

The cytoskeleton organizes shape, movement and intracellular transport: microtubules, actin microfilaments and intermediate filaments carry out different functions. Microtubules form the spindle used in division; actin takes part in contraction and in animal cytokinesis.

Three scenes: two plant cells joined by plasmodesmata that cross the wall; two animal cells with a gap junction and surrounded by extracellular matrix; and cells with a cytoskeleton, one with microtubules, cortical actin and a transported vesicle, and another in metaphase with the spindle and the chromosomes. Plant cells cell wall plasmodesmata Animal cells gap junction extracellular matrix Cytoskeleton microtubules vesicle cortical actin mitotic spindle chromosomes shape and transport chromosome separation

The plasma membrane: fluid mosaic model

Every organelle, and the cell itself, is wrapped in a membrane. The fluid mosaic model says that a membrane is a phospholipid bilayer (hydrophilic heads facing the water, hydrophobic tails facing inward) with proteins floating in it like tiles in a moving mosaic, plus cholesterol and glycoproteins. Because the core is hydrophobic, the membrane is selectively permeable: small nonpolar molecules cross freely, while ions and large polar molecules need channel or carrier proteins.

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Unit challenge. As a future biomedical researcher, you must analyze real cell samples from electron micrographs. Your objective is to prepare a comparative technical…

Unit challenge. As a future biomedical researcher, you must analyze real cell samples from electron micrographs. Your objective is to prepare a comparative technical datasheet demonstrating cell diversity and organelle function.

  1. Data collection: Access the public scientific repository Cell Image Library (cellimagelibrary.org) and select two micrographs with a visible scale bar: one bacterium and one eukaryotic cell (animal or plant) where its organelles are clearly distinguishable.

  2. Measurement and calibration: Measure the scale bar and cellular dimensions with a ruler. Using the relationship $\text{Magnification} = \frac{\text{Observed size}}{\text{Actual size}}$, calculate the actual size of both cells and of two representative organelles (such as a mitochondrion or chloroplast), expressing the values in $\mu\text{m}$ (e.g., $1.5\ \mu\text{m}$).

  3. Reasoned report: Design a comparative table contrasting prokaryotes and eukaryotes, discussing the function of the measured organelles and explaining how they support the modern tenets of cell theory and the endosymbiotic hypothesis.

Evaluation criteria:

  • Accuracy in calculating actual cell sizes and correct use of scale in $\mu\text{m}$.

  • Morphological identification and appropriate functional justification of the organelles.

  • Conceptual rigor in linking observations to cell theory and organizational models.

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Back to the start: the soccer player's muscle cells get their ATP from the many mitochondria packed with cristae, which respire glucose using O₂ that crosses the membrane.

Summary

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