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Cell biology · The cell and its organisation

Observing the cell

The discovery of the cell has always depended on the quality of the instrument used to look at it. Think of a school science fair: a pond-water slide looks like nothing under a magnifying glass, but under a good microscope it is full of life. The better the microscope, the more internal structures can be distinguished; and the better the sample is prepared, the more faithfully what we see reflects what really happens inside the living cell.

Light and electron microscopy

When you look at a drop of pond water in your biology lab you can see paramecia swimming about, but if you try to focus on their membrane or their internal organelles, the image shows nothing more than a transparent mass with no detail: what differences between light and beams of electrons explain why we need two such different types of microscope?

Cross-section comparison of a light microscope, where visible light from a lamp passes through a living sample and is focused with glass lenses to the eye, and a transmission electron microscope, where an electron beam travels down a column in a vacuum, passes through a dead, dehydrated sample and is focused with electromagnetic lenses onto a fluorescent screen. Light microscope (LM) Electron microscope (EM) transmission (TEM) eye eyepiece lens objective lens living sample (slide) condenser lamp (visible light) electron gun condenser lens dead sample and dehydrated objective lens projector lens vacuum column fluorescent screen visible light · glass lenses allows living cells to be observed electron beam · vacuum electromagnetic lenses (coils)
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Distinguish between light microscopy and electron microscopy: what each uses to "illuminate" the sample, what type of structures each technique allows us to observe, and…

Distinguish between light microscopy and electron microscopy: what each uses to "illuminate" the sample, what type of structures each technique allows us to observe, and whether it is possible to observe living cells with them.

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The light microscope and its magnification

When you look at an onion root tip slide using different objective lenses in the microscope, the size at which you perceive the cells changes dramatically: in what way do the objective and eyepiece lenses together determine the final size at which you observe the sample?

Side view of a light microscope with eyepiece, nosepiece with objectives, stage, focus knobs and light source; the objective forms a magnified real image inside the tube and the eyepiece magnifies it again, so that a 10× eyepiece with a 100× objective gives a total magnification of 1000×. eyepiece real image nosepiece objective stage light source knobs coarse and fine eyepiece 10× × objective 100× = 1000× total magnification
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Explain the difference between magnification and resolving power of a microscope and explain why greatly magnifying an image without improving resolution (so-called…

Explain the difference between magnification and resolving power of a microscope and explain why greatly magnifying an image without improving resolution (so-called "empty magnification") does not allow further details to be distinguished.

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Cell size and surface-area-to-volume ratio

Why is a bacterium a few micrometers wide, and why can't a single cell grow as big as a basketball? The answer is geometry: as a cell grows, its volume (which needs supplies) increases faster than its surface (where supplies enter).

Resolving power

When you zoom way in on a low-quality photo on your phone, the image becomes huge but the details do not increase and everything turns blurry: why is the magnification of an optical instrument of no use if it does not improve the minimum distance at which it can distinguish two nearby points?

Comparative resolution scale contrasting the limits of the human eye (0.1 mm), the light microscope (200 nm) and the transmission electron microscope (0.2 nm) with the sizes of cells, bacteria, viruses and molecules. TEM · from 0.2 nm LM · from 200 nm eye · from 0.1 mm atom protein ribosome virus bacterium eukaryotic cell frog egg 0.1 nm1 nm10 nm 100 nm1 µm10 µm 100 µm1 mm logarithmic scale
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The diagram shows a scale of sizes with the resolution limits of the human eye, the light microscope (LM) and the transmission electron microscope (TEM). State which…

The diagram shows a scale of sizes with the resolution limits of the human eye, the light microscope (LM) and the transmission electron microscope (TEM). State which instrument you would need to observe in detail: a) a flu virus; b) a bacterium; c) a ribosome; d) a skin cell. Justify each choice based on the diagram.

TEM · from 0.2 nm LM · from 200 nm Eye · from 0.1 mm Atom Protein Ribosome Virus Bacterium Eukaryotic cell Frog egg 0.1 nm 1 nm 10 nm 100 nm 1 µm 10 µm 100 µm 1 mm Logarithmic scale
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The electron microscope reveals organelles and viruses that the light microscope cannot show. Explain which property of the electron beam gives it a higher resolving…

The electron microscope reveals organelles and viruses that the light microscope cannot show. Explain which property of the electron beam gives it a higher resolving power and point out two practical limitations of electron microscopy compared to light microscopy.

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Preparing the sample

Comparative diagram of sample preparation: in light microscopy, thin section and staining; in electron microscopy, fixing, dehydration, embedding in resin, ultrathin sectioning and contrasting with heavy metals. light microscopy thin section + staining electron microscopy fixing dehydration embedding in resin ultrathin sectioning contrasting with heavy metals

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