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5th Year HL · Biology
Biotechnology · Biotechnology techniques

The applications of biotechnology

The same toolbox (PCR, restriction enzymes, plasmid cloning, CRISPR) is used today to make insulin for people with type 1 diabetes, design pest-resistant crops, clean up oil spills, identify a person from a single drop of blood or, in the most controversial case, consider correcting hereditary diseases before an embryo is born. By the end of this page you will be able to discuss the benefits and the ethical issues of each.

Gene therapy and vaccines based on nucleic acids

Children with severe combined immunodeficiency (SCID) are born with almost no defences against infection and once had to live in sterile bubbles, until it became possible to introduce a working copy of the ADA gene into their own white blood cells and return them to their bodies. How can we use nucleic acids not just to study a disease, but as a direct medicine inside human cells?

Gene therapy: a viral vector (modified virus) carrying a working copy of the gene enters the patient's cell by endocytosis and carries that gene to the nucleus, where the corrected gene remains. working gene viral vector (modified virus) nucleus corrected gene patient's cell

Why mRNA needs a delivery system

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Name two applications of biotechnology in healthcare and briefly explain what each consists of.

Name two applications of biotechnology in healthcare and briefly explain what each consists of.

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What is gene therapy? Give an example of a disease targeted by this strategy and explain its underlying principle.

What is gene therapy? Give an example of a disease targeted by this strategy and explain its underlying principle.

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During the development of an mRNA vaccine against an enveloped pathogenic virus, the research team must overcome several physiological and cellular obstacles: a) If free…

During the development of an mRNA vaccine against an enveloped pathogenic virus, the research team must overcome several physiological and cellular obstacles:

  1. a) If free mRNA were injected directly into the bloodstream, it would be degraded within minutes and would be unable to cross the plasma membrane. Justify what biological barriers (molecular and electrostatic) prevent its entry, and explain how encapsulation in lipid nanoparticles solves this problem.
  2. b) Once in the host cell cytosol, describe which organelle translates the mRNA and refute the erroneous claim that "mRNA vaccines can permanently alter the patient's genome," providing two biological arguments based on the flow of genetic information and cellular compartmentalization.
  3. c) Compare the safety of this vaccine with a traditional attenuated virus vaccine in an individual with severe immunodeficiency: predict what risk of reversion or pathogenic replication the attenuated vaccine poses that does not exist at all with the mRNA vaccine, and justify your reasoning.
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Production of recombinant drugs: the case of insulin

Production of recombinant insulin: the human insulin gene is introduced by cloning into a plasmid of a bacterium, which is grown on a large scale in bioreactors to obtain pure human insulin. human gene for insulin cloning plasmid with the gene modified bacterium large-scale culture in bioreactors pure human insulin
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The diagram summarises, in four numbered stages, how human insulin is produced today. Explain what happens in each stage and account for the advantages this method…

The diagram summarises, in four numbered stages, how human insulin is produced today. Explain what happens in each stage and account for the advantages this method offers compared to extracting insulin from pig or cattle pancreases.

1 2 3 4
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GM crops

In many countries, the corn borer caterpillar tunnels into maize stalks and ruins harvests unless chemical insecticides are sprayed repeatedly, harming other insects and the soil. (Maize is grown for silage on some Irish farms, and the EU strictly regulates GM crops.) Is it possible to give the plant itself permanent biological defences by incorporating the defensive abilities of another living thing?

The Bt gene passes from the plasmid of the bacterium Bacillus thuringiensis into maize cells. The plant thus makes the Bt protein, an insecticidal toxin that kills the corn borer larva when it eats the plant. bacterium Bacillus thuringiensis Bt gene transfer of the Bt gene Bt gene Bt protein Bt maize cell Bt maize toxin insecticide corn borer larva dies when it eats it
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Bt maize incorporates a gene from the bacterium Bacillus thuringiensis that produces an insecticidal toxin. State two advantages of this GM crop and two risks or…

Bt maize incorporates a gene from the bacterium Bacillus thuringiensis that produces an insecticidal toxin. State two advantages of this GM crop and two risks or criticisms raised against it.

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Bioremediation and water treatment

Bioremediation of a hydrocarbon spill at sea: degrading bacteria, beside the slick and the drops of crude oil, use the oil as a source of carbon and energy. With oxygen from the air and nitrogen and phosphorus nutrients from the fertiliser they turn it into CO₂ and water and multiply. seawater fertiliser (N, P) O₂ from the air hydrocarbon spill degrading bacteria What each bacterium does hydrocarbons source of C and energy O₂ nutrients (N, P) breaks down bacterium CO₂ + H₂O more bacteria (biomass)
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Bacteria and other microorganisms play a role in sewage treatment plants. Explain what role they play in water purification.

Bacteria and other microorganisms play a role in sewage treatment plants. Explain what role they play in water purification.

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Bioremediation uses microorganisms to clean up hydrocarbon spills. Explain what this technique consists of and what conditions must be met for the microorganisms to…

Bioremediation uses microorganisms to clean up hydrocarbon spills. Explain what this technique consists of and what conditions must be met for the microorganisms to effectively degrade the pollutant.

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DNA profiling and the ethical debate on embryo editing

At the scene of a burglary in Galway, all that remains is a tiny speck of dried saliva on the rim of a glass, invisible to the naked eye. How can that almost undetectable amount of DNA become strong evidence that singles out one suspect among billions of people?

Same STR locus in two people: the double helix has the same flanking sequences, but the GATA unit is repeated in tandem 3 times in person A and 5 times in person B. Same STR locus in two people Person A GATACTAT GATACTAT GATACTAT 5′ 3′ 3′ 5′ 3 repeats of GATA Person B GATACTAT GATACTAT GATACTAT GATACTAT GATACTAT 5′ 3′ 3′ 5′ 5 repeats of GATA repeat unit in tandem (4 bp: GATA) flanking sequence: same in both people Different number of repeats = fragment of different length
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In a forensic investigation, a minute bloodstain is found on a victim's clothing (Sample). The police interrogate two suspects (S1 and S2). In addition, in a parallel…

In a forensic investigation, a minute bloodstain is found on a victim's clothing (Sample). The police interrogate two suspects (S1 and S2). In addition, in a parallel civil case, a woman (M) claims paternity of her child (C) from S1. The laboratory analyzes three short tandem repeat (STR) loci:

Individual / Sample Locus 1 Locus 2 Locus 3
Forensic sample 12, 14 9, 11 15, 15
Suspect 1 (S1) 12, 14 9, 11 15, 15
Suspect 2 (S2) 12, 12 9, 11 15, 17
Mother (M) 10, 14 7, 9 14, 15
Child (C) 12, 14 9, 11 15, 16
  1. a) Interpret the forensic results: can either of the suspects be ruled out? Does this match allow one to state with absolute $100\ \%$ certainty that the non-excluded suspect is the perpetrator of the crime? Justify your answer considering statistical probability and the need to analyze more loci.
  2. b) Analyze the paternity test data: deduce the obligate paternal alleles that the child (C) must have received by comparing their genotype with that of their mother (M). Based on these, determine with reasoned arguments whether S1 can be the biological father of C.
  3. c) Explain at the chromosomal and molecular level what it means for an individual to exhibit two different values at an STR locus versus only one (as in Locus 3 of S1), and what analytical technique allows these alleles to be distinguished after PCR amplification.
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A biomedical consortium proposes applying CRISPR/Cas9 technology to viable human zygotes to correct an autosomal dominant mutation responsible for Huntington's disease…

A biomedical consortium proposes applying CRISPR/Cas9 technology to viable human zygotes to correct an autosomal dominant mutation responsible for Huntington's disease prior to embryo implantation.

  1. a) Describe the two essential molecular components of the CRISPR/Cas9 system that must be microinjected into the zygote, and explain how they act in coordination to recognize and accurately cut the target DNA sequence.
  2. b) In experimental trials, two major technical problems are detected: off-target cuts and genetic mosaicism (some cells of the blastocyst carry the edit while others retain the original unedited allele). Justify at the molecular and embryonic developmental level why mosaicism arises, and predict what health consequences it would entail for the resulting individual.
  3. c) Distinguish precisely between somatic gene editing and germline gene editing. Scientifically justify why germline modification in embryos faces far greater ethical and legal opposition in the international community than gene therapy applied to the somatic cells of an adult patient.
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Using official data on GM crops

To judge a GM crop, use official data and compare it with the facts. In Ireland, sources include Teagasc, the Department of Agriculture, Food and the Marine and the EPA. Look for the area grown, the year and the unit (hectares), and note who published the figures. No GM crop is grown commercially in Ireland at present, so a report on this topic may also use data from another EU country, clearly referenced. In the unit challenge, use Irish and EU sources (Teagasc, the Department of Agriculture, Food and the Marine, the EPA) rather than a Spanish ministry.

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Unit challenge. Take on the role of a scientific advisor and prepare a technical report on the real impact of biotechnology on our environment. 1. Gathering official…

Unit challenge. Take on the role of a scientific advisor and prepare a technical report on the real impact of biotechnology on our environment.

  1. Gathering official data: Access the website of the Ministry of Agriculture, Fisheries and Food (MAPA) and compile the cultivated area (in hectares) of genetically modified maize ($MON\,810$) in Spain over the last three available years.

  2. Basics of genetic engineering: Create an explanatory diagram of the biotechnological process used to generate this GMO, detailing the use of restriction enzymes, cloning vectors, DNA ligase, and methods for gene transfer and integration.

  3. Analysis of applications: Compare this agronomic application with a medical one (such as the production of recombinant insulin or a therapy using $CRISPR/Cas9$), calculating the percentage variation in cultivated area to one decimal place (for example, $+2.5\,\%$).

  4. Bioethical assessment: Write a final reasoned proposal evaluating environmental sustainability, gene flow to wild species, and the socioeconomic impact of using biotechnological patents.

Assessment criteria:

  • Conceptual precision in describing recombinant DNA tools and stages.

  • Rigour in obtaining, tabulating, and carrying out percentage analysis of official MAPA data.

  • Critical and integrated argumentation regarding agricultural and biomedical applications from a bioethical perspective.

Solve

Gene engineering can also be applied to immune cells, and the figure below shows why the choice of target matters.

A T lymphocyte receives the gene for a receptor and recognises a target on a tumour cell; if the same target is on healthy tissue cells, these can also be attacked. Modified T lymphocyte Tumour cell DNA with the gene for the receptor Receptor Target Choice of target Tumour cell Target only on the tumour → efficacy Healthy tissue Target also on healthy tissue → risk of toxicity

Summary

Back to the start: the same toolbox serves medicine, farming, the environment and forensics, and each use raises its own benefits and ethical questions.

See all the exercises in this section